Electronic Journal of Biotechnology ISSN: 0717-3458
  © 2008 by Universidad Católica de Valparaíso -- Chile
Vol. 11 No. 2, Issue of April 15, 2008
 


Supplementary data 4. Analysis of E. globulus unigenes corresponding to transcription factors.


Best Blast Hit

Related Organism

Score

E-value

Coverage

Domains

putative MYB transcription factor

Oryza sativa (japonica cultivar-group)] cultivar-group)]

130

1e-28

30.8%

IPR001005
IPR006447
IPR009057
IPR012287

MYB transcription factor LHY-CCA1-like5

Arabidopsis thaliana

241

5e-62

90.1%

IPR001005
IPR006447
IPR009057
IPR012287

GPRI1 (GOLDEN2-LIKE 1); transcription factor

Arabidopsis thaliana

239

2e-61

77.9%

IPR000183
IPR001005
IPR006447
IPR009057

MYB-like transcription factor DIVARICATA

Antirrhinum majus

328

2e-88

73.9%

IPR001005
IPR006447
IPR009057
IPR012287

MYB-like transcription factor 6

Gossypium raimondii

288

2e-76

103.1%

IPR001005
IPR009057
IPR012287

MYB11

Malus x domestica

230

4e-59

50.3%

IPR001005
IPR009057
IPR012287

MYBR2

Malus x domestica

75.9

2e-12

41.6%

No related
InterPro

MYB-like DNA-binding protein

Catharanthus roseus

95.5

2e-18

24.4%

No related
InterPro

transcription factor MYB1

Malus xiaojinensis

88.6

2e-16

47.0%

No related
InterPro

MYB, DNA-binding

Medicago truncatula

78.6

2e-13

28.3%

No related
InterPro

MYB transcription factor LHY-CCA1-like5

Arabidopsis thaliana

147

5e-34

35.5%

IPR001005
IPR006447
IPR009057
IPR012287

MYB-related protein

Arabidopsis thaliana

218

2e-55

48.8%

IPR001005
IPR009057
IPR012287

IAA18; transcription factor

Arabidopsis thaliana

55.5

2e-06

33.3%

No related
InterPro

Transcriptional factor B3

Medicago truncatula

102

2e-20

32.7%

IPR003340

Transcriptional factor B3

Medicago truncatula

188

2e-46

22.7%

No related
InterPro

bZIP transcription factor protein

Capsicum annuum

75.1

3e-12

45.5%

IPR004827
IPR008917
IPR011616

Putative ripening-related bZIP protein

Vitis vinifera

171

3e-41

38.7%

No related
InterPro

bZIP transcription factor ZIP-2

Nicotiana tabacum

80.5

7e-14

32.9%

IPR004827
IPR008917

Putative ripening-related bZIP protein

Vitis vinifera

123

7e-27

37.4%

No related
InterPro

ATBZIP60

Arabidopsis thaliana

82

2e-14

61.7%

IPR004827
IPR008917
IPR011616

Putative ripening-related bZIP protein

Vitis vinifera

176

9e-43

45.2%

No related
InterPro

Putative ripening-related bZIP protein

Vitis vinifera

84.3

6e-15

16.3%

No related
InterPro

GRAS transcription factor

Medicago truncatula

67.8

5e-10

10.2%

No related
InterPro

GRAS transcription factor

Medicago truncatula

252

9e-66

33.4%

IPR005202

ATHB-7

Arabidopsis thaliana

142

2e-32

33.3%

IPR000047
IPR001356
IPR003106
IPR009057
IPR012287

Heat shock transcription factor

Phaseolus acutifolius

272

1e-71

60.7%

IPR000232
IPR002341
IPR011991

WRKY9; transcription factor

Arabidopsis thaliana

127

1e-27

75.4%

IPR003657

Putative WRKY-type DNA binding protein

Glycine max

380

1e-104

50.5%

IPR003657
IPR000583

Putative WRKY4 transcription factor

Vitis aestivalis

74.3

4e-12

34.4%

No related
InterPro

DNA-binding WRKY

Medicago truncatula

168

2e-40

38.3%

IPR003657

Putative WRKY4 transcription factor

Vitis aestivalis

240

5e-62

66.6%

IPR003657

Putative zinc finger transcription factor

Oryza sativa (japonica cultivar-group)cultivar-group

242

1e-62

35.1%

IPR000571

Putative zinc finger transcription factor

Oryza sativa (japonica cultivar-group)cultivar-group

243

4e-63

35.1%

IPR000571

Zinc finger protein

Malus x domestica

134

3e-30

26.1%

IPR007087

Zinc finger protein, putative

Arabidopsis thaliana

137

1e-30

52.4%

IPR000315

putative zinc finger protein

Oryza sativa (japonica cultivar-group)cultivar-group

133

9e-30

73.5%

IPR007087

Putative zinc finger transcription factor

Oryza sativa (japonica cultivar-group)cultivar-group

225

2e-57

31.3%

IPR000571

Zinc finger protein-like

Arabidopsis thaliana

123

6e-27

5.4%

IPR003349

Zinc finger protein, putative

Plasmodium falciparum 3D7

60.1

8e-08

28.8%

IPR002653

Putative zinc finger transcription factor

Oryza sativa (japonica cultivar-group)cultivar-group

239

9e-62

34.8%

IPR000571

Zinc finger protein, putative

Arabidopsis thaliana

109

2e-22

21.6%

IPR000315
IPR002906

Zinc finger protein, putative

Arabidopsis thaliana

152

1e-35

36.3%

IPR000315

Putative zinc finger transcription factor

Oryza sativa (japonica cultivar-group)cultivar-group

218

2e-55

28.4%

IPR000571

 


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